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BMC type: BUF1


Organism: Clostridium cylindrosporum DSM 605. Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

               CLCY_4c00650 (fasta)
                       CLCY_4c00660 (fasta)
                                  CLCY_4c00670 (fasta)
                                       CLCY_4c00680 (fasta)
                                            CLCY_4c00690 (fasta)
                                             CLCY_4c00700 (fasta)
                                                     CLCY_4c00710 (fasta)
                                                       CLCY_4c00720 (fasta)
                                                              CLCY_4c00730 (fasta)
                                                                         CLCY_4c00740 (fasta) HMM13382deam_1_buf1 BUF1 (HMM details)
                                                                          CLCY_4c00750 (fasta) P_moss BUF1 (HMM details)
                                                                               CLCY_4c00760 (fasta) HMM02441_04 BUF1 (HMM details)
                                                                                CLCY_4c00770 (fasta) H_fuchsia BUF1 (HMM details)
                                                                                  CLCY_4c00780 (fasta) H_banana BUF1 (HMM details)
                                                                                      CLCY_4c00790 (fasta)
                                                                                       CLCY_4c00800 (fasta) H_treeGreen BUF1 (HMM details)
                                                                                               CLCY_4c00810 (fasta) HMM01977ubiD_1_buf1 BUF1 (HMM details)
                                                                                                  CLCY_4c00820 (fasta) HMM02441_02 BUF1 (HMM details)
                                                                                                      CLCY_4c00830 (fasta) HMM00857isoch_1_buf1 BUF1 (HMM details)
                                                                                                               CLCY_4c00840 (fasta) HMM13382deam_1_buf1 BUF1 (HMM details)
                                                                                                                         CLCY_4c00850 (fasta)
                                                                                                                               CLCY_4c00860 (fasta)
                                                                                                                                   CLCY_4c00870 (fasta) HMM04199cycl_1 BUF1 (HMM details)
                                                                                                                                             CLCY_4c00880 (fasta) HMMreg13556_1_BUF1 BUF1 (HMM details)
                                                                                                                                                     CLCY_4c00890 (fasta) HMM00860tp_2_buf1 BUF1B (HMM details)
                                                                                                                                                             CLCY_4c00900 (fasta) HMM00860tp_2_buf1 BUF1B (HMM details)

BMC shell protein types:

BMC-H(map on tree)

       H_fuchsia
       H_treeGreen
       H_banana

BMC-P(map on tree)

       P_moss

(complete list of loci)

Protein sequences:

>CLCY_4c00650_UniProt_A0A0J8D899
MKKVFLSKLTVLITLVIFMFSSTVAFAAPISKKTKLSTSPKEAKVLSLNSTYDFSVKEGDNLWFKVNTGSIKISKTHLSVKVEGVNASISIFPTLKKAEEFNTHNDYFMREGSLSYPIAWNSNEYYVMLTAPKSGAIKLSINSEKKAPELYNRSIDLCPLELMAKDNISISKLLPELRGVRDNMLNSSETGKEITKVYYEVAMNMYLPLIKNKELRNTLLSEVRKINTLLNEVVNISNRKNSNYIIKSEDIDSLTKIKDILSSSLNKELKNKIDTLWKKLNLENYINKELTTFIKDKISRDIEVFTNSQVIVTTSSNINLNKVKNLVNNSLAKYNILEEVKVQETKTLFNKNEKTFIVNIPSKKYMNSLQGHLEKNSGINSVEENYVFYALDNDVNYNYQWSLENTSQSIPVKDMNGAVINLKGKRGSDINYKPLIDVIEDIQFKNIPIAVIDTGINYDLADFDGKVDLDKGYNFTNNTKNVMDDNGHGTHVSGIISAKANNNYSMTGVNQYSTIIPIKALNSYGAGNMFSIAQAIKYAVDSGAKVINMSLGARLLDGTPINPSELPFIEEALKYAIDKNVTVVAASGNESKNNLSYPASSEFSLSVGAINNKDERTGFSNYGKGLDIVAPGESVPSLLENGEVTYASGTSMAAPNASAVVGFLYSVDSNMTPKKVRDILYKTSRDIGKKGYDNEYGYGCVNLSSAVSKAIKERVVK

>CLCY_4c00660_UniProt_A0A0J8DCW5
MDLDKIYNENRDLINSTSIDFLTDKYIVNRGREISLDSITIEKLLEVKEEIFQNEEAKLLLKAYLSLYFKGEESLKGYCDLSSILLEKGDLFFLLVAIAKINDLELLYKQKGIPDSILYDTLSDIRIWAENHNVKTGNLGLSELHWLRHHLNGELFKIGRLQFHKIDFSGDVMLFKQATTRFPLLLSYGDINYDFLGNKTEKDEEFISTYIESDITITANPIREGKCQRETVTINKCDYSLEIKNGTSLLSMHIQQGEKLDISKCIHSMKEAIRFYYKYFNGDIIKGFTCTSWLLNRNYRYILPDESNIRKFASMFYEYPMVVRNDQMYRRVFNGEMDIEKLIDIGNKTQLQEVIIKGIKEGLTFEDASIIFPSYDMRKLDRFMSINVF

>CLCY_4c00670_UniProt_A0A0J8DCV9
MDLDYGIIHSGYRHLKYARCKYSMYNIKSFTRRVLRNETFAFQIILNSNEEFLCSLNEFNNISWKGLINRIRVSIDLNDDTIHENVKLSLVDYIVDDNGSLTADIISDKDSLLVEGGIAQLIWVKGKVPLGFNGSFNFNINLFYTKEYDDEELIGSIPCEIKVLDYDLPSLQESPFYLDLWQHLSSLARHYNVPIFSDDHFYIIENFIKELASAGQKTITIVASDFPWGGQGCFKVHKNASNLFEHNIVSVRRDVNGELYLDFTSLDRYIDICFKYGIDKEIDIFGLIGNWHGMDFKSPVYPEYKDPFRVSYYDEGNGKIKYISSKDELHLYIKLLLNHFINKGYIEKTRIFCDEPNNPELYEESKRFISSTVPGVTLKYKCAVHDPRFLLKPDSGITDSSIFLPMIGERFEKFEEVRESILGKEDSITWFVCCYPQRPNQFIASPPLESRLVGHITYMLKASGFLRWNYCLYTEDVYNNPSYKYPSWVAGDTFFVYPGSNMKPVSSIRWENMKMGIEEYTLMKMLEDKGYSYEVISGLGLYDITGSISSMKGDARSFKMGYSLSQNDYEVFRENLINLLLK

>CLCY_4c00680_UniProt_A0A0J8D7T0
MKTLKSAISNFLLIIIASCMVIPFIYMLLISFNVTYNEYNISFTSLTLENYKTILQDSTFLRYFINSSFIAVSGVILNVTFSSLAAYSFAKLDFKGNESIFFFMIMTLIIPSQVTMIPLYIIMKNLGLLNTYWALILPLPTAFGVFLMRQSILNIPRELIESARIDGLSEFKIFLYIVLPLIKPSIVALSIFTFIGAWNEFLWPLVATSGDDMKTLTVGMSTLGVQHHTNYGLVMAGATLTFLPAFIFYVLLQKKFQQGVTLSGMK

>CLCY_4c00690_UniProt_A0A0J8G319
MYILPIGIILFSFYIIPMIMSMVFGFTKYNIMSPAEFIGLENYKGLLTDTMFKDSLKNTLIFSLVSVPFQTIIALIFAVWLTSKESKFYNFVKGVIFIPVISSMLLISVIWKVFLNLQTSPINMIFNIFGATPPNWLGNPSIVLFTLIAINIWKNIGYFVVIYVSAIMDVDRNVYEAAKLDGVNKLQEFKDITLPLLKPTTIMVVFLGVIWSFQTFDLIYNLTGGGPGTRTMTLVLNIYNLSFKDFNAGYAMSVANVLLFIIATVSILQKTLLKRDKSTIY

>CLCY_4c00700_UniProt_A0A0J8D8A4
MISAINPYGVNSNFRAQGNAAGDYLCLDLVIKTCKSMEISVNEFWSSYDPKKFYIGIQGINFNTVGARLNVKA

>CLCY_4c00710_UniProt_A0A0J8DCW9
MKRFSKILATMLILVVTIAAFASCSKSDNKSKSTSSAKEITVWLPPIGPNDKPVWEPIFKKFEKENNCKIKLEIIPWQNYPEKYATAIQAGTGPDVGYMYAEMYPQFIKMGAVEDLTKRFTDEDFKNYTYLDASKMMGGMYGFPIEAANPGVLYFNEDIVKATGEAAILAKLKKHEPITWDEFLTVAKKATKDINGDGKVDQWGFAQGWGATFFGDLNWNWYNYLWQAGGDIYTEDLKGVKFNDAAGVKAAKFLYDMKNTYKIIPSDAMSKTNEDMLKTVFGPGKAAFAIGLSSKASELFDKEFKNLKYDFTISMKDKKAATFASVDQLTLMSAAKDKDLSFKLMKHMLSAESMTAFHKYNPRAPISKDEPYQGDPKFKEMIEKDKGIYRPLVVGPNGVEIYEYLWKELQKTMNGEKSPEAALNDAAKYANDLISKNSK

>CLCY_4c00720_UniProt_A0A0J8DCW4
MKLNYNLKCNLANTLNIVGDKWTLLVLHRIFKGINIYKNLLEALSPIPTNILSNRLKLLEENKLIIAELYSEHPPRYKYVLTEKGEDFRDVFYSMIIWGEKHLDNCDKTVLHEKCGEKVEIKYYCSNCNEYVEDLIVNVYEDKNK

>CLCY_4c00730_UniProt_A0A0J8D7T2
MDYLKIVVVFFQGIISFFSPCILPILPIYISILSNSSVGSVKDENIKFRNTYLFKNTILFTLGISTTFFILGSSVSFLNKILSSNKDILMFFGGLLIIIMGLFYMGLLRIPYLQREKKFNMEVKNMKPLTAYLLGFTFSFGWTPCIGPILASVLVMASSSESVLSGNILIFVYSMGFIVPFIVIALFYNKLFKILDSIKKNMNIIKAIGGIILIISGAVMMANGAERTYNYFFKDSTPKVQESKEQLEEGSKEEDKDVAPDFTLTDQYGKTHTLSDYKGKTVFLNFWATWCPPCKEEMPSIEKVYKEYGENKGDVIILGATFPEIFKERDEEYITNFLKENNYTFPVVFDSEFELGESYYINAFPTTFIIDKEGNIKHFSPGAMDETTMKQLIESVK

>CLCY_4c00740_UniProt_A0A0J8G324
MLNMKSLKESIEYRKLIDVLMGDKDHADIVLYHGNVINVISREIYVADVAIKGKYILVVGDASKLVGPNTVVVDVQGKYISPGFMDSHMHFESSMLTVTEFSRLSIPSGTTTLVADPHEIGNSLGPIGMKAMADECSVVPNHVQLQVPALVPDCPTLETASYDVTSKDMEDLLNYPNILGIGELQGFSNAQHVYNNTPEVIDDLVASTQYAKSLGKPVDGNAPDLFGCDLAAHIIACGGTCSCHETTKKDECVEKVRQGVYVFMREGSTQRNMAECIKAVTEEGLDSRRLILASDDMVAEDLEKKGHMNDIVARTIREGVNPVEAIQMVTINPATYWGFNDRGALLAGRLADIAIISDLNNMVVDAVFIEGKLVAAEGKLLIDLPTYTYPDSCKNSVKRGPVTEKDLEIAANGSTATVRAMEVIPDQNLTGKMEFNVRVNNGVVVADTAQDCLPICCLERYGRNGNIGKAFINGFGLKTGAFAESIAHDTHNILVVGTNYKDMMIAANRVIELKGGIAVSNNGRVIDELALPVGGLITDELNGFEVSAKIAQLEALVKNELGCKIHAPFMHLSFVGLSTSPDWKITDFGLVDVNNFKILPAVVE

>CLCY_4c00750_UniProt_A0A0J8D8A9
MNIGKVIGNVVATRKDETLTGSKLMLTQPLDIDLKANGDPIIMVDTVGAGIGEIVMFTTGTASRNAAEKPDSAIDAAIIGIIDYVDVDRSSIEK

>CLCY_4c00760_UniProt_A0A0J8DCX4
MNKNKMTMDILEKLSIKVTRGAYPGIEVKSVASNQVQSTQIFAPQVPKNDTKLLVVFTGSNLGFEESLSEAKKLKDLGYTIDVAISESAESMFGEERFRSLNPRSLYTAKDKMNYLEMVQNVDAVVVPIATQNTAIKLSLGLQDSFISMLLWQSLWQGKTLFMNMDDMTTHRGMEAKSKMLLQMMSGYVDKLKRLGVKPISTLNLSKSIHESFTSEKNSSIKFEGAIERPVITEKDILKRAAGDTITVPLRAIITSLAQEAAKNLSINIVRQNG

>CLCY_4c00770_UniProt_A0A0J8DCW8
MATGQALGMIETKGLTAAIEAADAMVKAANVALVGYEKIGWGLVAVMVRGDVGAVKAATDAGAEAARSVGELHAVHVIPRPHSEVERVILKSE

>CLCY_4c00780_UniProt_A0A0J8D7T8
MRSALGVIEVIGLGTAITALDAACKAADVTLVGYDKVIGVNKAISVVVNVAGEVAAVKAAVEAGAAAATRVGTLVSSHVLARPHEELDMLINEFAKNLKKKVVKEESVVEEATVEPVVEEVEENIEEATTDEKSSNKNDKKNKK

>CLCY_4c00790_UniProt_A0A0J8G329
MADLLSVAMFKNIVNKSNFSDKTTAKCSSSVSRLNQSQENMLVGLLNKSQNLSSYVSSASKTSASQATSNLGGNCGKKVSLSEMIKPSNASGSVKSASEVLNSMAKPAVASNPQLGQKVDIQSLIGGVKTPKAAAASYDAKKSTTVTLNELAAKCKKSTDVPVETTVKVETGVKKSVIANALGIDSLVPKISLNSIGKSNSFFK

>CLCY_4c00800_UniProt_A0A0J8D8B4
MKQAIGIVETKSLVAAIQASDTMVKAADVHVVDFNYVGSGIVAVIVSGEVAAVTAAVESASEVIGQIADIISTNVIARPHDEVDKMINQ

>CLCY_4c00810_UniProt_A0A0J8DCX8
METQMLRATMRQLEQLGEIEVCNVPVDPKFELGAVLSHFNNQKPILFNNVKGYNMPVLGGLYGNRDLYHKLTNTNTEERIFKYMNAIANPQPARIVNDGPIKENIITRNIDIPRMFPAPTSHDSDSGAFLTAGMFIVRDPETGYTHMAVRRFQVRGGNIINALISGHSPALREQFAEFEKINKPLECAVVLGYDATYLLASQIGSRRYGLDKHQVDSALRGEALELVKCHTVDLEVPAFAEMVFEGVLLPNRREIEGPFGELMGYYGETAPNPVMEVRCIMHRNNPIFQHAFPCREEHLANGLIREVELYGALKNMVDVQDVNITIGGGCRLHAVVSIKKKKEGDGKAAILAALGSCYDIKHVVIVDEDIDIYDPMSVELALASRVQAAQDVVIVPGANGSGLEASHVYRGVSDKMGIDATKPLNDPHGLFTMAYIPGFENGVDIEKYIPGINK

>CLCY_4c00820_UniProt_A0A0J8DCX3
MKVIVGVSGGSGAIYGVALLKVLKELGIETHLVVSTLGEHVVEHECGIKLDELKKLATYYHDNKNLAAPIASGSFKTDAMVIVPCSMKTVASVAYGLSDNLLTRAADVSIKENRKLIVVPRESPLSTIHLENMLKLSKLGVTVLPPSPGFYSQPESIGDIVALIVGRILDQLGIEHNLLKRWGEEA

>CLCY_4c00830_UniProt_A0A0J8D7U2
MARYGICVIDMLNDFIGESAPLRCPGGEEIVPNLQKLFKWARARMDAGHDDVHLIHIQEAHRKHDADFRVRPVHAIKGTHGSDFIKELYPEDRRCEYIIPKRRHSAFQHTDLDLYLREENLDTVVITGVWTNVCCRSTAADALANAYRVITLTDGNHSKTQAQHESGLVDLSIFTKLTTIDQFTADIDAGVDAWAGAGDQKNEVK

>CLCY_4c00840_UniProt_A0A0J8G334
MKFDVIVKNARIPQGHANETVVTNILIKDEQIAGFVNCIDGIDAVNVIDAAGNLVLPGCIDSHTHFMDPGFSHRETVESGSQQAARGGITTVIDMPCCTVPSARNVDQFNWKKEYWSEHCHVDFALWGGVTGEDVRLKQLHVVKDQADAGAVAFKVYMTPSVPTYPRVTDPELLEIAKAVAETGLSMGVHAENFAMCDFYVNKLKEEGRLDGPAWADARLELAEKVAIELGISISEATGVRYHVVHMSTSIGAKLIRQGKMRGLDVTSETCPHYLTINAQDAMTEYHACAKIAPPLRTKKDNAELWEGLANGSVDFIATDHAPYNIELEKTGRDIWTAFPGIPGIETMVEIIVNGFNDGKITLEKMVEILSKNAAIHYGLYPKKGSMQVGSDADLTIIDLDKEWTIDKDDKDSYMQNKYTPLQGIKLKGRVNKTIVRGHLVYEEGTGIISEAGFGNFIPRQNEDKLERKLRFIEYKPTTF

>CLCY_4c00850_UniProt_A0A0J8D8B8
MKTDVQIAQEAQMKPITEVANYLGIQDDELELYGKYKAKVSLDVLERQKDKEDAKLVLVTAINPTPAGEGKTTTNVGLSMGLNKIGKRTITALREPSLGPCFGVKGGAAGGGYAQVVPMDDINLHFTGDFHAITSAHNLLAALLDNHLHQGNALNINPKKIVWKRVIDMNDRSLRNVIIGLGGNGDGFVRQAQFDITVASEIMAILCLATSMSDLKERLSKMIVAYAKDGSAVTAGQLEATGAMALLLKDAVKPNLVQTLENTPAFIHGGPFANIAHGCNSVLATKVALKLADYVVTEGGFGADLGAEKFFDIKSRFAGLKPNCVVIVATVRALKMNGGVPKTELAAENVEAVKKGVANLERHIENVAKFGVPAVVAINKFPLDTEAELKAVEDACNAKGADVVLSDVWANGGEGGVEMAKKVVEICEKNEANFAPLYDVNLSIPEKIEKIATTIYRADGVDFTSDCKKQIAELEKLGLDKMPICMAKTQYSFSDDPTLLGAPTGFRITVREVRVSAGAGFIVALTGNIMTMPGLPKVPAANGMDILESGEIIGLS

>CLCY_4c00860_UniProt_A0A0J8DCY2
MSQEKKYILAVPNFSEGRRQDVIEAVVDQVRNVEGVKLVSYEPEHDFNRTVVTVIGEPAPLKTALKNMAKKCYELIDMREQSGSHPRIGAQDTIPLFPFRNIELEEVIAIANEIGNELFEETKMPIFFAAENASNEERKALAFIRKGQYEGLRDLLKDESNADREARKPDLSVDGKLSDTAGATIVSADNEGLTAFNIFLATEDVATAKAIAKGLRGPSGGFSTVRAVGIKFPERSGVVVSMNMLDCSQTPLYRALNFVRSEAARYGVAVTGTELVGPIKLDYVLNSFEYGLALEGFNKEQILEYHLMG

>CLCY_4c00870_UniProt_A0A0J8DCY0
MALKLIDLSQEIYEGMPLFGIHQKTFFMTNQTHEQNMAATGSKTLGFYARNILMSEHCGTHSDAVIEYKPGGASIENMPLDYYWGSAICLDFSHKRYPDYIDIKDFEEALASSGLEIQKGDIVLMYTGNYNRNYGTDAYTDKYTGISYDAAKWLAEKGVVNIGVDAPAIDQTPDDLDFSGHLVCAEYDITNTEHLCNLDQVAGKRFLYIGLPLKIRGGTGSPIRAVALVEE

>CLCY_4c00880_UniProt_A0A0J8D7U6
MIKNGVTIDDILKMECMKESRLVAGSGGENNIITQVNVMADPDVLNWVDEGELLLTTAYSFNADNMEEQMNLIKECSKKKLAGIGIKIYPYLNSLPDEVIQLANELKFPIIDLYYATALSDIITPIFREIFNRQAYILQKIESIHKQMTNAILMGASVEDMANVIFDHIKNPIFVKLDFPEKSIYKSSSEDLSIKSVLIKNAEGFNQSIMKITDNNIYESKEFIRGAHVSRVVMPITIKNNVYGHVFAWGINSSIQGIDISILESASTTIALEVLKNLSIREVENKYRAEFLDDLLSIEERRSEKALERASFFDIGIEDKSLIILISIKDEVYKKDDISRGNNQENITKIVHFIEKSFKDLSLKGIVAGKTESIIVLLSFKKDTEINYSLGEFVKFVNEMFEKRFSEFSFKMGIGRSYLGLEKSYKSYKDALEAIAAGEILGEGNIVYFENLGIYKILCQENLREEIEKFYKMNLEPLVEYDSKKSTELVKTLEAYFEHNGNLKKMSDALFTHYNTILYRLSRIKEITGVNFENAKDRLNLEIALKIKMLLKK

>CLCY_4c00890_UniProt_A0A0J8G339
MQTQSIDKLNEKLPVSQLIPLGLQHVLAMYAGAVIVPIIVGQGIGLNPKQLAYLVAADLFTCGIATLIQTLGILNFAGIRLPVVLGCAFQAVFPMISIGKDYGIEAIYGSIISSGIFVLFAAYFFGKLLKFFPPVVIGSIITIIGLSLIGVAFNNLGGGAQATASKTFGSLQNIGIGIFTLLIIILSNKFFKGFMQTISVLIGIISGTILAYLAGIVSLDNIVNEPWLNIVTPFYFGFPKFVPAAIFTLCLVSLVSMIESTGVFFATGNVCEKKIEEKDIVKGIRAEGIAQVLGGIFNAFPYTTFSQNVGLIALTKVRSRYVVVSAGIILIILGTIPKFAAIATIIPPCVLGGAMIALFGMVAISGIKTLSVVDFTKTSNMLIAACSIAVGLGVSITPDLFAFFPKNLKLFFESGIVSGSIVAILLNILLNWNELKGNVKPEMVLPDEHSL

>CLCY_4c00900_UniProt_A0A0J8D8C2
MQNHTVDKVNEKLPLYQLLPLGLQQVLAMYAGVIIVPMIIGKGIGMTPEQIAYLVAADLFTCGIATLIQSIGIGKFAGIRLPVILGCAFQAVAPMIIIGTKFSIGSIYGSIIASGIFVLIASYFFQYLLKFFPPVVIGSIITVIGLSLINVGIYNLGGGQGAKDFGSARNLLLGFFVLIFIIVVNRFFHGFFQSISVLLGIIVGTIIGAFMGMVDFSIVGQEPWFRVATPFYFGTPEFHFIPIVLMCIIAVISMIESTGVFFAAGTVCEKEITGDDVGKGLRAEGLAQIVGGVFNSFPYTTFSQNIGLIALTGVRSRFVVVTGGFILIILGMLPKLAAIATVIPTSVLGGAMIALFGMVAISGIRNLQMVDFSRTSNMLVAGVSIALGLGVTMVPSIVAGFPSYAKMVFESGIVTCSISAIILNLFLNWNEIFNGGTPTITKRD

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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