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BMC type: BUF1


Organism: Paraclostridium bifermentans ATCC 638. Bacteria; Firmicutes; Clostridia; Clostridiales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

       C672_2152 (fasta)
              C672_2153 (fasta)
                     C672_2154 (fasta) HMMreg00356_1_pdu1d GRM3B (HMM details)
                              C672_2155 (fasta) HMMreg00072_4_pdu1d PDU1F (HMM details)
                                   C672_2156 (fasta) HMMreg00072_2_pdugrm EUT2E (HMM details)
                                                      C672_2157 (fasta)
                                                           C672_2158 (fasta)
                                                              C672_2159 (fasta)
                                                                   C672_2160 (fasta)
                                                                                C672_2161 (fasta) HMM13382deam_1_buf1 BUF1 (HMM details)
                                                                                  C672_2162 (fasta) P_moss BUF1 (HMM details)
                                                                                    C672_2163 (fasta) HMM02441_07 BUF1 (HMM details)
                                                                                      C672_2164 (fasta) H_fuchsia BUF1 (HMM details)
                                                                                        C672_2165 (fasta) H_banana BUF1 (HMM details)
                                                                                          C672_2166 (fasta)
                                                                                           C672_2167 (fasta) H_treeGreen BUF1 (HMM details)
                                                                                                     C672_2168 (fasta) HMM01977ubiD_1_buf1 BUF1 (HMM details)
                                                                                                         C672_2169 (fasta) HMM02441_02 BUF1 (HMM details)
                                                                                                             C672_2170 (fasta) HMM00857isoch_1_buf1 BUF1 (HMM details)
                                                                                                                        C672_2171 (fasta) HMM13382deam_1_buf1 BUF1 (HMM details)
                                                                                                                               C672_2172 (fasta)
                                                                                                                                    C672_2173 (fasta) HMM04199cycl_1 BUF1 (HMM details)
                                                                                                                                              C672_2174 (fasta) HMM00860tp_2_buf1 BUF1 (HMM details)
                                                                                                                                                       C672_2175 (fasta)
                                                                                                                                                          C672_2176 (fasta)
                                                                                                                                                                  C672_2177 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_fuchsia
       H_treeGreen
       H_banana

BMC-P(map on tree)

       P_moss

(complete list of loci)

Protein sequences:

>C672_2152_UniProt_T4VNY4
MKKICVIGSLNMDLVVNVDEMPKKGQTLIGSKFKEIPGGKGANQAVAASRLGGEVYMIGKVGNDGFGQSLLKQLKADKVKTDYVQIEKGPSGVALITVDKNAENSIVVSPGANFELTESDIDKCIDGIKESSIVVIQLETPIDTIKYALEKSKELGKFTILNPAPAVKLSDDIIKNVDLLTPNETELEILSGVKIENEDDIKKAANVMIEKGVKQLIVTLGSKGSLYLDKDKIEFKKSYKVEAVDTTAAGDSYTGALSVAFSQGKDIDEAMDFASKVGALCVTNIGAQTSIPNLYDVMNHKF

>C672_2153_UniProt_T4VHM1
MSVYLAEFIGVAMLIFFGCGVLAGNSLKTSGSYQAGNVAINIAWGCTVAMVIYCLGDISGAHINPAVTIMQAVRGNFEWSLVPGYILAQIAGGMFGGLLVYLQFINHWEKTDDPQAKLTIFATAPTIRNNLANFFSEYIVTFALVFCILGLDTNTFPSGLKPLAVGCLIFLVGTSFGGVTGAALNPARDLGPRLAHLLLPIPGKGSSDFKYAWIPVVAPIMGAVTSGLIHLALYDGIVDYRLYTMIGLTIGTFVGIKLVSKNENEESIASELIDEIA

>C672_2154_UniProt_T4VQ20
MNIKTKDIASKSGVSIATVSRYLNKSGYVKQETRELIKNAIQEIKKQDNIYEKEKNIAVVFPDLSNMFFTDVLKGLTEEADKLNYNIFSFDSGESIEKEMKIIDALKDFNICGLIITTTIRNRETTKKHVQNLNSLGVPIILIDRDLIFCDFDGIFSDNKKGAFDGVDTLIAEGHQKIAVITGPLEYETAQLRLEGYKQAHNVNGLEINENYIHEGDYQIDSGYNLTKKIINNNKDVTAIFSCNNMMTLGVINALNEMEMKIGQDISLLGFDDLEFFTYLGLNISVVSRQTSEMGKIAFEVLSKKILEEEPYTTQNIVLKPSIVLRGSEKLIKINSKTEAK

>C672_2155_UniProt_T4VR26
MELYKNSEIKKTLIIIVITNLITFAILTLVFFISYDKLKIDYIENKAYTIGSLSSKYPNLENDIVSLSFSNVNKKDLDYGLDIIKDYGYSTKLNMKFIGNFNNIFVITCIFIGIIMIVFTFINIEISNIYHRKVCIKLNRLTNASKEILACNYDVDIDEYEEGEFSKISYAFGQMRDVIKNQMNNINKEKEFLVRIISDISHQLKTPLASTMIFNEIMLSENVDELQKYKFLKASKTQLERMEWMIKSLLNLSKIDAKAIKLKKNEVNLNLIIREVLTSLDMLSVENNVEIVFEEKDKAIICGDKEWIREALINIVKNSIEHSKNSSVRVSIEKSKVFTKVIIKDNGEGIKKEDIPNIFNRFYRSNKPNSVGIGLSLSKSIIEANNGYIEVSSELGGGSEFRVVFY

>C672_2156_UniProt_T4VRA4
MEKILLVEDDEALAMGTEYSLLAEGFEVKVVGSVEDAKSEIENNDYDLAILDINLPDGTGYEACKFIRKTKDMSIIFLTALDEEVNIVLGLDIGADDYITKPFRIRELISRIKAVLRRSNKYNFGKRYLKSGDIIVDTFSIDIKKNRQEILLTTQEYKLLLSFMKKPNQFLSRDDLLESVFKKDYYYVDDNTISVYIKRLRDKIEDNSKEPKYIVNKRGMGYKWNMEVEEVM

>C672_2157_UniProt_T4VNY8
MINNYKSVSNRYLKYNKKRTQLMIIGIILSIALISSIGTFLLALQNSFVQEQINLNGNYHIILKNIDKEKFEKIKNNPQIEFISPENEMVYDNFVGNKKINVKSGNKSLFNIENVQIKEGRLPEKNNEIVIESWILKYFKKPINIGDKLKVDNKEYILVGIANDKWDSKASGITNGYVLDINVEKDIKNLPIYIKIKDNANKRDVINDITKLVGKNNIAENDRLLKFTGESKDKSMNGALFGIGAIVVGIVVMATIMLIYNAFNISIAERIKQFGQLKAMGATKKQIRTLILREATTIIIIAMPIGLFLGIISIFGILGIFKSFTREADIKFIISPIVIIGSMVIGATSVYISALLPAIKVSKISPLVAISSSNSISKEKIKKSRRKYNLNKMLKVNQIMAIKNIKRNKKRFYITSISMAMSVILFISFISFAKYAGNFTEKITEESKMSFRISQNFEGDREYFIDDNMLESIEKLNGIENAYSSYTPIKLKAVVDEYVIPKIIKDQNYDFINTVKYENKDYKYLSVLMNAFDKNKLEALNPYVSSGSIDNLKENEVIVIKNEKMPNAILSPVMNLKVGDEIKIDPNYFYKQERLTQDQYSKGLEPKIEENAKDSYNKNQLITLKVSAVIDDAPYYLGMNGIQKIILPTENLKSIIKDNDVAKSQFNRESVGIKCDSKNVDKVEKELNSFIKMYPDFNVKNVEDLNKEAMAYNLLPIILLLGFTIVITLISSINIINTISTNITIRTKEIASLKAIGMTSKELKSMICLEGMCFGIYGGIVGSIVGTILSYIIYLKFSEIKGFAYNIPYIEIIVAIVGVIVIGYISALIPMKKLRKSNIIEAIKEN

>C672_2158_UniProt_T4VHM5
MKVLEVRNLKKYYGQGENKVKAIDNVSFSINKGEFVAVVGQSGSGKSTLLNLLGGLDRPSSGSVVINDNEIYKLDDDRLSIFRRRNIGFIFQFFNLIPVLDVEENIAFPTLLDNEKVDSKYLDEIINTLGLQKRRNHLPSELSGGQQQRVSIGRALINKPAIILADEPTGNLDSKTTKEVIDLLKCTAKKYNQTLILITHDEKVAEQADRVITVSDGKIIDDVYNA

>C672_2159_UniProt_T4VQ24
MKKEIYNKLDELDIKYNILEHDEVFTADEFYAVTKDMPGHHCKNLFLKNSNKSLNYLVVSKHDKAVDLKEIKSQIGSSRLSFDSPDKLYELMKVTPGSVNPFSIINDTNSVVEVIIDNDLLDGQNLNFHPAINTETFNISGDDFIKFLDYIDNKVVKVSI

>C672_2160_UniProt_T4VR30
MNIDEDKRLNCCEKFESKIIKDNWGFSYIESNVNFKSVSVSVLPKNAVWEDMEGFVDRKYGPFGYYIRNKNDEIIANLIFYFSYSCKGTFNGKGSYLADATVSPKTISASPGYYLDCNVTASEPKNYGTKENPAPGVTLRLQVKISSYKDLTNYNVCGTSKLENIDEKSMCTSQNEIDCNQSNNLNFIYPHCSYDGLNSIEFFAIATLRGDCQVNLISAECY

>C672_2161_UniProt_T4VRA8
MKYIKQAMEYKELIDTLMSYKHHADIVLYGGNIVNVLTKEIYTGDIAIKGKHILMVGDCDKLIGENTIVVDVRGKYLSPGFIDSHMHFESSMLTVTEFSRLSIPSGTTTLIADPHEIGNALGTVGMKAMADEASFVPNYVRFVVPALTPDCPSLETAGVDVSSKDMEDLLNYKNIIGIGELQGFSNAKHVYNNTPEIITDLLASTTYAKSIGKIVDGNAPELFSNELAAHIVCTGGKCSCHETTTKSECIEKLRQGVYVFMREGSTQKNMGECIKAITEEHLDSRRCILATDDMVAKDLQELGHMNEIIKRTIREGVSPVEAIQMATINSATYFNLEDRGVLAPSKVADIAIINDLNDMDIEAVFIEGKLVASNKKLLIDLPKYTYPNSVKNSIKIGKINEKDIEIISNEREVVARCIKAIPDQNLTECMEVKLKTRNNVIEADITNDILHIACIERYGRNNNIGKAFVNGFGLKKGAFAESIAHDTHNITVVGTNIKDMVVAVNKVIEMGGGIAVVNNGRVLEELRLNVGGLITDELTGSEVSEKIDLLESVVSKDLGGNLHAPFMHLSFLALSTSPKWKITDKGLIDVNNFEVLSSIVN

>C672_2162_UniProt_T4VNZ1
MQIGKVIGTVVATKKDDSLVGSKLMITQPLNLKNEIDGKPLIAVDTVGAGIGELVIYTEGTAARNATKKLQSSINAAIIGIVDNIDVWED

>C672_2163_UniProt_T4VHN0
MKEKIDFTKNILNKISKNIKKDNKKESSNCKTLISNNKFNSIDDNSYVMIPTNHRNIKEILDLLNNNHTNYKNETIDHENKNDEASKEVITLNDIMNLNEDRISISKNTIITPMAKDYIKQKKIKIEIGG

>C672_2164_UniProt_T4VQ28
MGQALGMIETKGLVGAVEAADAMVKSANVTLMGYEKIGFGLVTVMVSGDVGAVKAAVDAGAEAARNVGELHSVHVIPRPHSEVERVILSRD

>C672_2165_UniProt_T4VR34
MRKALGMIEAVGLTTAIAALDAASKAADITLVGYDKVIGVEKAVSVTIHIAGEVAAVNAAIDAGVEAGNKVGKIVSSKTIARPHEEIDVLIKEFEKNLKVKNINKKVIENKSKENN

>C672_2166_UniProt_T4VRB3
MADLLTKAVMKNISNKALNKKTCKKEENKKIENINCKEVEILKSILYKNSKKNNLNNLNNEKHINKEMKFKSLKDLNHNIVVDKNINTNNKCKNMISLKDLAK

>C672_2167_UniProt_T4VNZ6
MKALGIVEVKSLIGAIQAADTMLKSADVELVDIDLVGSGIVAAIIKGDVAAVKAAVENGEESAGRLAEIISTNVIARPHDEVSKIL

>C672_2168_UniProt_T4VHN4
MESQMLRFTLDKLEKSGYLKTCKKRVDKEFELGAVLRYFDNEVPIVFKNIKNYDIDLVGGVYGNRKIFNDLMDVNEENRIYKFMDAIANPKSYKEVKSGPIAQNIITKNIDINKLFPIPTSHEKDSSNFITAGMLIIKDTETNDTHMAVRRFQINDKDNISALVSGASPHLNNIIKKAELNNEKLECAIVLGYDAEFLIASQISSSKYGLDKYEVYSALKNEPLEVIKCSRVDILVPAFCEIVIEGYLDPNKKIKEGPFGELMGYYGEVSNHPTIDVKAIMHRDNPIFQHAFPSREEHLSNGLIREVEIYSALKNIVDVIDINVTVGGGCRLHAVVKINKKNEGDGKSSILTALGSSKDLKHVVIVDNDVDIYSYKDVEFAIASRVQASEDVIIIPNALGSPLEASHVNKGLSDKMGIDATKPLDNELFNRAIIPGYENINIDDYF

>C672_2169_UniProt_T4VQ32
MKIVVGISGGSGAIYALGILQALRELGVESHLVVSNMGEYVAEHECGVSLDELKKMADFYYENYDLAAPIASGSFKTDGMIIVPCSMKTLASVAHGFSESLLTRCADVCIKDRRKLVLLPRETPLSSIHLENMLKLSNIGVTIMPPTPGFYNHPQDISDIVSSIIGRCLDQFDIEHNLLKRWGE

>C672_2170_UniProt_T4VR39
MKRHAILVIDMLNDFVGEKAPLRCPGGEKIIPDLQKLFAWVRERNARGLDDVQLVHIQEAHRKNDADFRVRPVHAVKGTWGSDFIKELYPQGEEYIVPKRRHSGFAHTDLDLYLREENIDTVVVTGVWTNVCVRSTASDALYNAYKVITLSDGVHSKNDEMHEAGLRDLSIFTKVMSIDDYIDAWEKDLDPWVGGGDTENKVE

>C672_2171_UniProt_T4VRB8
MDLIIKNANIPQGDEMVLTNILVKDEKIVGFVDDINMIDAKEIIDANKNLVMPGCIDSHTHFMYQGFPHRENFLTGTAAAATGGVTTIIDMPCCSVPSVRSIEQLETKLGICGPQAVVDYAMWGGVTGEDVREGWMHNVKEQADYGVVAFKVYMTPSVPTYPRVTDPEMFECFKAVSETGLPIGIHAENFAMCDFYVNKFKEEGRLDGPAWAEARMELAEKVAIELGISFAEASKARLHIVHMSTGIGAKLVKEAKMRGLDVTSESCPHYLTLNYQDAMTEYGPLAKIAPPLRTKKDNEEHWKGINDGSIDFIATDHAPYEIESEKLKEGTNIWTSFPGIPGVETMVPVIVSEGYNKGKISLSKLVDILSTNAAKHYGLYPKKGALNIGSDADFAIIDLNKEWTIKNENLVTMCGYTPLEGMKLKGRIIKTIVRGNLVYEDGEAGVLGKLENYDVVFNNPEELTSGEYKVSYRKDHPELILEHVKNIKGIKVKPGFGKFIKRQTISKLDKNIKF

>C672_2172_UniProt_T4VP00
MEKKQYVLAVPNFSNGKDKDVIEAIVDVVRNSNVKLVSYEPEADFNRTVVTFIGEPEDVKDALVNMAKKSIELIDMREHKGTHPRIGAQDTLPIFPLKNITIEECVKLSKEIGERLHKESKVPIYFAGESASTEERKAFAYIRKGQYEGVRDLLKEIKDDSSRQEEYNNRKPDLSVDGLLSEKAGATLSSAEVNGLTAYNIFLGTENVEIAKKIAKALRGPSGGFSTVRAVGIKFPEKEGVVVSMNLLDCYQTPIHRAFEFVKREAERYGVIVTGSQLVGPIKLDYVLDTFNYYLQLEDFKNEQVLETHLMDM

>C672_2173_UniProt_T4VHN8
MGLKVIDLSQEIYQGMSVFPMHQPTFIMTNMTHEENMKRTGSKTLGFSARNLLISEHGGTHSDAVWEYKSSGKTIENMPLEYFFGSAICIDLNNIPYSRYIEIKDIEISLKESKLQIEKGDILLMYTGHYDRNFNTDKWQTEYSGLSYDAAKYLATSGVVNIGVDAPAIDHPKDLNFSGHLVCGEYDITNTENLCNLDQLVGKRFLYFGLPLKIREGSGSPIRAIALLED

>C672_2174_UniProt_T4VQ36
MSENSSSQKIKNQNNSGLLYRIEDRPNLQLSILLGFQHIVAAFGGIVAVPLVIGPAIGVDVRTTAMLVSATIFVAGLATIIQARGIYKIGAKLPCIMGTSFTFVGPAITVGTSMGLAGIFGATILGSFIEMILSRFIKPLMKFFPPVVTGTVVTLIGLTLVPVSMDWCAGGIGSPTYGSITNICIALMVMVIVVGFNIYGKGVLSSSSILIGMFVGYLACIPIGLVDFTPIKEASWIGLPGIPVILEHGIKFSLAGVAPFIIAYLVTTIETVGCLIAIGEASDIKTSSEQLSKGVLADGLGSFLAGFFGVCPNTTFSQNIGLIPITKVASRHVVIISGVIMMLLGIFPKLGALVASIPSPVLGGAGIVMFGVVAASGIKTLSKVNINNRNLIIISVSIALGLGITTRPELLTVLPESLKLLFGSGISTGTIFAVMLNILLKDTE

>C672_2175_UniProt_T4VR44
MELYKINGILNLNLNIAATIALTCFLIILGKIVKRRISILDRLCIPGPVIGGIFFALLVFLLNQFNILTIVLDTGLQSTFMVAFFTTVGIGASFSLIKKGGKSVLIYWIFCIILIFSQNIIGLLGALLTGLDPLLGLMCGAISMGGGHGTSATFGPTLESMGVVGANTIGLAAATLGLICGGFVGAPTSKFLIEKYKLKPNDSLSNNLHNHSEIEDDMNSEIAVASDSKISSKLDSSEFIKHICILTTCMSLGYVVSNFIGKITGYSLPEYVGGILVAILFRNSNDKFKFIDVDYSCFELLGDISLNLFLTMALMSIKLWELKTLGLPMLIIVLMQVLFIILFTVFVMFKLLGKDYDAAVMVGGFIGHELGATPNALANLNSICSRYGYSEKAFFTIPIVCAILIDLVAIPTIIMFINMLS

>C672_2176_UniProt_T4VRC3
MKKVIVGILIGIVVIIGGCAAMFTAGVSSVDKAVNQVKEDTVKNDSKVKDLAKDMSWEVEKDQFTTKIVGTFENKSNEKIDYLQFDYKLIDKEGTVIESSFTNETDIMPKEKRKVEILCSKNDFDKYEITAKSSAF

>C672_2177_UniProt_T4VP05
MNIDAEYKISIYEELKSIHKSRKSEIFLVQSTLDEKFYIKRVLKEYTIEVYENLTHIESNNMAKIYEAFEYEDKLIIIEEFISGDTLQEILKKEGMISENTVVKYMIELCNALKKIHNLNPCIIHRDIKPANIMISNDGVLKLIDFDIARLYKYGENMDTTLLGTKGYASPEQFGFDQTDCRSDIYAIGIMMNVLTTGKHTKEIENHGKLKDIIKKCTKISADERYQSVENLEEDLKELINTSYKEIKKTYENKKIDNDTKTLNINTKKSNSLWDILPGFRSRNKLNMMLAILWYLFLITGIVFVDSTTTFIENILVIGLLLSLFLLYTNFLNIKSKLPMIRSKERYFSIFGYIIYSFILFMIFGLGLELLK

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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