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BMC type: BUF1


Organism: Alkaliphilus metalliredigens (strain QYMF). Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

     Amet_4565 (fasta)
           Amet_4566 (fasta)
                       Amet_4567 (fasta) HMM13382deam_1_buf1 BUF1B (HMM details)
                              Amet_4568 (fasta)
                                       Amet_4569 (fasta)
                                          Amet_4570 (fasta)
                                                Amet_4571 (fasta)
                                                         Amet_4572 (fasta) HMM13382deam_1_buf1 BUF1 (HMM details)
                                                                  Amet_4573 (fasta) HMM00860tp_1_bufgrm BUF1 (HMM details)
                                                                               Amet_4574 (fasta) HMM13382deam_1_buf1 BUF1 (HMM details)
                                                                                Amet_4575 (fasta) P_moss BUF1 (HMM details)
                                                                                     Amet_4576 (fasta) HMM02441_04 BUF1 (HMM details)
                                                                                      Amet_4577 (fasta) H_fuchsia BUF1 (HMM details)
                                                                                        Amet_4578 (fasta) H_banana BUF1 (HMM details)
                                                                                           Amet_4579 (fasta)
                                                                                            Amet_4580 (fasta) H_treeGreen BUF1 (HMM details)
                                                                                                     Amet_4581 (fasta) HMM01977ubiD_1_buf1 BUF1 (HMM details)
                                                                                                        Amet_4582 (fasta) HMM02441_02 BUF1 (HMM details)
                                                                                                            Amet_4583 (fasta) HMM00857isoch_1_buf1 BUF1 (HMM details)
                                                                                                                      Amet_4584 (fasta) HMM13382deam_1_buf1 BUF1 (HMM details)
                                                                                                                                  Amet_4585 (fasta)
                                                                                                                                        Amet_4586 (fasta)
                                                                                                                                            Amet_4587 (fasta) HMM04199cycl_1 BUF1 (HMM details)
                                                                                                                                                       Amet_4588 (fasta) HMMreg13556_1_BUF1 BUF1 (HMM details)
                                                                                                                                                           Amet_4589 (fasta)
                                                                                                                                                              Amet_4590 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_fuchsia
       H_treeGreen
       H_banana

BMC-P(map on tree)

       P_moss

(complete list of loci)

Protein sequences:

>Amet_4565_UniProt_A6TWR8
MVAIILASGFSQRMGTNKLLLPYQEKPILQWVIEGIEQLHMEKIILVYREEAVKSLVKNRNIQLIYNEEAIQGQSQAVIKGLQAVDESVEDYMFFMGDQPLLVLEELKEMIRAYGESPASIAVPYYEEKPGAPVIFSKRWRRSLLQLRGDSGGRRIIRDNQDEVLFYPIKQALMGWDIDTQRDYEELLKEDM

>Amet_4566_UniProt_A6TWR9
MKLIEVLDMEGIAHGMITIIGSGGKTSTLYRLAVELGDQGNNLLLTTTTAMKLPKNSQKMKVLIESDIEVLHDYLMKFKDARQIFAGKELIGDDKVKGYDPEDLVWLHQRLEGRQILVEGDGSKGKSLKIPASWEPQVPQSTMLTIVVIGWDIIGKSLEEKWIHRCHLLKDKNLLGDENITNRKVDEAMLLKLLESPLGLLKGIPPNSSVALLLNKVYTEDEKKLATKMASIVLSQIPRIGKVLLGEVQVKGQLTVGKE

>Amet_4567_UniProt_A6TWS0
MKDDIKRRIDLAAGRKRSQLVLKNAQILNVFSHEIISGDIAIDQGKIVGIGNYNGLENIDLEGKVVVPGLIDGHVHMESAMVTPGQFARAIVPRGTTTIVADPHEIANVCGIPGIEYMLKASEGMPLNVYMMLPSCVPATSFENAGANLKAKDLAPLINHEKVLGLGELMDYPGVIAGEESIIDKIMIAEGKMIDGHGPDIKEEALNAYVAAGVRTEHECSTVEEMINRLRLGMYILIREGSAARNLKTLVRGITPENMRRCLFCTDDKHPEDILEAGHIDHNVRVAIKEGLDPISAVKMATINAAECYGLKDLGAIAPGYRADLVVLDNLETFHVTKVFKDGKLVAQDGKAFFEAQSTEDHTVTQTVNAKELTPEDLVLSLETDIVNVIKLLPHSLVTQRVSRKVEVKEGTFRYHEDLDILKLAVIERHKRTGNIGLGLVEDFRLKGGAIASTVAHDSHNIIVIGDNDEDMLLAVNELNTVGGGITICSKGEILQTLSLPIAGLMAQGTMEEVNEQLKQMLEIAYKKLGINEQIDPFMTLSFLALPVIPELKLTDLGLFDVKNFRFISLNR

>Amet_4568_UniProt_A6TWS1
MKMRGVGIGSAFYGTGYGNGFPDISRCQVELQKDGKVAVYVGATEVGQGAKTIMSQMAAEVLGLPLEDIIFSCEDTRLTPDAGTAAASRQTYNTGNAIKKACENLRQRLIDVAVAEFKFNSDVGVTMKNGLVYFKTFPSKSITLQEIASKFVEVPLREEGVFTAQTTKMDEETGQGAPYWPYTFNVYGIILEVDTETGIVDILKAVCAQDVGRAINPELIEGQMDGGFAMGLGYALMEDLNLQQGQMKHKRFSNYLIPTALDIPELEKIIIEDPESTAPFGAKGIGEPVMLGVAPAILNAIYDAVGVRITEIPVTPQRLLKALKK

>Amet_4569_UniProt_A6TWS2
MTVKYEIVGKRAIRVDGRSKVTGQATYPEDLQMEGMCYGRTLRSEKPHAYFTLNTEKAEAIEGVLCILTSKDVPHNHHGVLLKDHEVFCAHKVRRVGDPMAFVVAENEKVAEQAMEAIEVSYEELQGVFDPEEAMADSAPQVHDKSNVIYHYKIRRGDIQEAFKQCHVVVEGEYRTDMVDHAFLQPESGIAYTEEDGTIVICVANQYPHFDQLEVAEALEVELDTIRIINPAVGGAFGGREDITLQIHLALATQRVGRPVKATYSREESFDAHSKRHGMKMKYRTGADQQGKLLAMEATVIGDTGAYASWAINVARKAGVHATGPYEIPNVKVDSYAVYTNNPFAGAMRGFGAAQTPIAHEQQIDEIGVKLGIDPITMRVINGFKTGSETATGQILEESAPFEECLRAVEEALRSYQGPGEGQ

>Amet_4570_UniProt_A6TWS3
MRDIILSVNGKSYKVTIEEEMRLIDVLRNKLGLLGVKEGCGEGECGACTILMDGVTVNACMVMAFQAEDKAIFTIEGLSDGVNLHPIQQAFIEIGAVQCGFCTPGMVLSAKALLDQNNYPTREEIREGISGNLCRCTGYNKMVDAIELAGELLRKGGNDSEV

>Amet_4571_UniProt_A6TWS4
MNVKKVYRGKTVAEVLELLEQYGSRSYVIAGGTDAIIQLREKHIDPEVMVDISSVKEIQFIRESQDEIVIGGGTNFTSISESPMLQGRVKGLAQAARMVGSPQIRNTATIGGNICNASPAADIVPPLLALEAEVVIEKKGEKRRIPLDTFLMGKGKLDLKPEELVTAICFKRPKDGQGLGFGKLGLRKALAISRIATAIFISIDEKGTCKEIKIASGAVGTRGLREREVETIFTGKVLTEEVIDEGLQQLSHVVGQRLAGRSTADFKATAVKGICRQALLAALASCQA

>Amet_4572_UniProt_A6TWS5
MSKVLIRKGTIVTMNDKREIFQGDVLIDGNRIEAIASHIDAEADEIIEAEGRVVIPGFIQTHIHLTQTLYRGQADDLELMDWLKERVWPLEGSHGPESNYISAQLGIAELIKGGTTSIIDMGSVHHTDSIIEAVEESGFRAIVGKCMMDYGKGVPDSIMEETESSIKESVALLRKWHGRDNGRIQYAFAPRFVVSCSEELLVRVRDLAREYDVMVHTHASENRGEIELVQRDRGMRNIKYLHHLGLTGEKLILAHCIWLDDEEMRLLAQTGTRIAHCPNSNLKLASGIAKIPELIEMGAYVSLGADGAPCNNNLDQFQEMRSAALIQKARLLSPTVMPAQQVFEMATLGGAEAMGMQDELGSLEPGKKADLAIINLDGLHSNPGHGVDVISRLVYSARASDVETTIIDGKIVMKDRKLTTLNENFILNEANRIIQQQTIKAGVRK

>Amet_4573_UniProt_A6TWS6
MKNENVPEGFLEKQFKLTEHKTNVKTEVLAGITTFMTMAYILIVNPIILSEAGMDFGAVFTATALSAIVGTLVMAFYANYPFALAPGMGLNAFFAYTVVLGMGYTWQFALTAVFLEGIIFIILTFLNVREAVVNAIPKNLKHAVAVGIGLFIAFIGFENADIVVSGQFVGFDGALDGLIVELGNLSAAAPLLAIIGIILTGVLLAKNVRGALLIGILATTVLGIPMGVTQVPEGLQFMSTPPSLSPIFFQFDFSNIFSLDMVIVLFTFLFVDMFDTVGTLVGVASKADMLDENGNLPRAKEALFADAVGTTVGACLGTSTVTTYVESAAGVAEGGKTGLTALSAAGMFAIALLFSPLFIMVPGAATAPALIIVGLFMMSPIKKIDLDDYTEAIPAFLTIIMMPLSYSIADGIVFGMVSYVALKLLSGKGNKVSPIMYILALLFIIKFAI

>Amet_4574_UniProt_A6TWS7
MLDAVGIKEAIIYRQLIDVLMADNQFADIVLYQGNVINVLTREMYQADIAIKDKYILMVGDAGKLIGPDTLVVDVRGKFLSPGFMDSHMHFESSMLTITEFSRLSIPSGTTTLVADPHEIGNALGPIGMKAMAEEASVVPNHVHLVVPALTPDCPGLETAGYDITSKDMKEILNYPNVIGIGELQGFSNAKHVYRNTPEVITDLVASTTYAKSIGKIVDGNAPDLFGQELAAHIIATGGKCSCHETTTKEECVEKLRQGVYVFMREGSTQRNMAECIRAVTEEGLDSRRCILATDDMVAEDLEKLGHMNEIVKRTIAEGVDPIEAIQMVTINPATYFGLEDRGVLAPGKLADIAVISDLKEMTVEGVFLEGKLVASQGELLIDLPPYIYPEEVKHSVKCKKIQESAIAIPASGKEALVRCIELIPDQNLSGSLEVTVKTQQGNAISDVAQDALQMVCVERYGRNGGIGKAFVKGFGLKHGAFAESVAHDTHNIMAVGTNSKDITMAINRVIEMEGGIAVVKNGRVIEEMRLPVGGLITDELTGPEVSQKIVDLERVTKVELGCSVHAPFMHLSFLALSTSPSWKLTDQGLIDVNNFKILPPVIE

>Amet_4575_UniProt_A6TWS8
MHIGRIIGTVVATPKDERLMGCKLMLTQPLNIDKNPVGEPLVAVDTIGAGIGEIVLYARGTAARYAANRLQSPIDASIVGIIDHIDIPGD

>Amet_4576_UniProt_A6TWS9
MNGHEQAREILKNLTNRAKGVDQGPDDIKKHLLIVLTGKADGLEAALREIPRLKRYGFSVDLALSTCAEKILNEKKIVIPLQVGKIFTVREESLACKAIDVVQRVIVPAMTQNTAIKLSMGIQDEFIPRLLWQCLWKGKPLLVNLEQLLCYRGMAPQQPFLEEMMKEYIEKLQKMGVKPLSETAYGLELIEQDEDPTQKGQKVSHEKIEGKPLSFGERQVITEKDISLVPGGQKQMTLPLGTIITPLAYDKAKEKGIQLIKG

>Amet_4577_UniProt_A6TWT0
MMSQALGMVETKGLVGAVEAADAMVKAANVTLVGYEKIGFGLVTVMVRGDVGAVKAAVDAGAEAARAVGELHSVHVIPRPHTEVERVLLKGE

>Amet_4578_UniProt_A6TWT1
MQAALGLIETLGLTAAIAALDAAAKAADVTLIGYEKVIGAGQGVSVTIQIAGDVAAVKASVEAGVIAAERTGRVLAHHVIPRPHEEVNVLIEAFKKNVKKKQQAEPKKEAPKSKKKQDVSSDSVKK

>Amet_4579_UniProt_A6TWT2
MANPLAKVILGNIANQKKVTSGQKVVKSWTQHLSSNEEQSLLSIINENKKLETKKGVMTQPHQPRMVTLGELSGKKPGEEMTASSKGQEQKEKDDNRIQALLSQINSNKKVEPNKFETQKGVISGPHQQTMNTLAGLSGKASEKEMMKSGTVQHPGKETSNGIQTVSLGDMSKGLGMTAKKRK

>Amet_4580_UniProt_A6TWT3
MRQAIGMVEVRSLVAAIQAADTMVKAADVQIVDLNYVGSGIISVVVTGEVAAVKAAVDSGEEAAGRLAEVISTNVIARPHEEVDKLLDQIIG

>Amet_4581_UniProt_A6TWT4
MENQMLRATLAQLEKKNLLETCHVEVDPKYELGAVLSHFNNEKPIIFKKVKGSQYPVAGGLFGNREIYYDMMGTTEKDRITQLMDAVANPKPTKTLPKGPVMENIITRSIDLQKMFPIPKFHGGDSSSYITSGVVVLKDPETGKVHTSVRRLQMNERNEMSILVASPLATQQYRGFENQNKPFEVAIILGYDYPFLLASQISSATYGIDKYEVDSALRGEALELVKCHSVDLEVPAYAEIVLEGIMPPHKREQEGPFGELMGYYGNQGSHPIVEVKAVMHRNNPIMQVAFPCREEHLSNGLAREMELYAYVKNMVDVVDVNVTVSGGCRFHGIVSIKKKSQGDGKSAIIAALASSKDMKHVVIVDEDVNIYSHDEIQWAIATRFQASQDLVMIPGGLGSGLEPSHTLRGVTDKLGFDATKPLGEAAKYFERAAIPGFESIDIERYFPQLKK

>Amet_4582_UniProt_A6TWT5
MRLIVGITGASCTIYGVGLLQVLKQLGIETHLVVSKMGQEVVSHECGMALEELKELATFYHDNDNLAAPIASGSFKTDGMIIVPCSMKTLAAVANGLSNNLLTRAADVVIKERRKLVVVPRETPLSLIHLENMTKLAKIGVTVMPAAPGFYHQPETIGDLVSIMVGRILDQMDIENNLFTRWGEE

>Amet_4583_UniProt_A6TWT6
MAKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLSIFTKVMTVDQYIQAWENDEDPWVGGGDAQNKVK

>Amet_4584_UniProt_A6TWT7
MKYDVIVKNARIPQGDDTIVTNILVKDEKIAGFLTDIEGVEFDKTIDAEGHLTIPGCFDSHTHFMDPGFTHRENFLTGSSSAAAGGLTMIMDMPCCSKPSVRSIPELESKINNIKEKAIIDFALWGGVTGEDVREGKKHIVQDQADYGVCAFKAYMTPSVPTYERVTDPEMLEAFRWVAETGLPVGIHAENYAMCDFYVKKFQAEGRMDGPAWAEARLVEAEQAAIELGINFAESAGARLHIVHMSSGIGAKLVGAAKKRGLDVTSETCPHYLMLNYQDAMTEHGAFAKIAPPLRTTKDNKELWEGLQNGSVDFMGTDHAPYEIETEKDAEGMNIWTAFPGIPGVETLVPIMVSEGYNKGRLSLSKLVDVLSTNAAKQYGLYPKKGAMHIGSDADFTIIDLEREWTIDQKKTYSMAKYNPLHGIKLKGKPVKTVVRGTVVYDDAIGIVGKEGFGQFVKRQNIQKLDRVIKY

>Amet_4585_UniProt_A6TWT8
MKTDVQIGQEAKMLPITEIAARLGIKEDELELYGKYKAKVSLDVFDRLKDKPNGKLILVTAINPTPAGEGKTTTNVGLSMGLNAIGKTTMTTLREPSLGPNFGVKGGAAGGGYAQVVPMEDINLHFTGDIHAITTAHNLLAALLDNHIHQGNVLDIDTRRIAWRRVLDINDRTLRNTIVGLGNRGDGVAREDGFDITVASEIMAILCLATGMDDLKMRLAKMIVAYNGANEPVTAGDLEATGSLALLLKDAIKPNLVQTLENTPAFIHGGPFANIAHGCNSALATKLALKVADYVVTEAGFGADLGAEKFFDIKCRFADLKPDCAVIVATVRALKNHGGVPKGQLNEENLQALEKGFGNLEKHIENVQKFGVPVVVAMNEFPTDSEAEVALLRALCESKGAEVVLSQVWAKGGQGGVEMAKKVVEIVESKPSEFKPLYDVNDSIVDKINTIAKEVYGADGVDFSKGALKQIKGYEELGLDKMPICMAKTQYSLSDDPTLLGRPTGFRVTVKEIRVSAGAGFLVALTGDIMTMPGLPRVPAANHMNILESGEIIGLF

>Amet_4586_UniProt_A6TWT9
MSTEKQYVLAVPNFSDGRRKEVIEAVVEPLRNVEGVKLVSYEPEHDFNRTVVTVIGEPGPLKEALLNMAAKSYELISMEEQQGSHPRIGAQDTIPLFPFRNISIEECAKLAEEIGSEVYKRFEVPVYFSGENARCEERKSLAFIRKGQYEGLKEVAHTDERKPDIGPAALHATAGATIVSADHEGLTAYNVFLATEDVSIAKKIAKGVRGPSGGFSTIRAVGIKFPERTGVVVSMNMFDCTATPLYRAFSFVKQEAQRYGVTVTGSELVGPVKLEHLLNSLEYHLGLEGFRKEQILETHLME

>Amet_4587_UniProt_A6TWU0
MALRLIDLSQEIFQGMSVFPMHQPTFIMTNMTHEDNMEATGSPTLGFSARNLLISEHGGTHCDAVWEYKSSGATIDHMPMGHFWGSAICLDLSHIPASRSIEPRDLEEAVSKSGQEIRKGDIVLLYTGHYDRWFGTDKWQTTYTGLSYNAAKWLAEQGVVNIGVDAPAIDHPDDINFSGHLVCGEYDMTNTENLCNLNELINQRFLYFGLPLKIRDGSGSPIRAVALVEE

>Amet_4588_UniProt_A6TWU1
MHRQNGITIDEVLKMECMEKSKLIAGFKGTGNAVTKVNVMADPDILNWVDEGELLLTTAYSFQKDDKEAQKSLIQACSEKGLAGIGIKIYPYLECLSEEVLAIADKLNLPIIDLYYATPFSDIMTPVFREIFNRQTSLLQRLEKIHERLMKVVLAGGEVKEIAQVVYENLRNPIAIRIGAPHQWLYHLEDIEDVMKQALKRDAQGFYDPNLSQWKEKKLDERVELIQEKYLRRMVMPIVVKNSVYGHIFAWSVFTPLGGFDLSVLETASTTMALEILKQLSVRDVENRYRGEFLDDLLSLDATRKQKAMERAHIFKLDAQSSYVMIIIQFQHQSREVVGFLEEKLNSISSEIQSFLSELSFNVFLVNKTDSIHLLVDLNGTNQAEQVLKNFTLNLNELLNKKMKTQDFGIGVGRMYKGLCQSYKSYHDAMKAIETGAILEEGQMTYFDDLGIYKILCQDVLKEELEQFYQVTLSSLDQYDSKKKTELVKTLEMYFQYNGNLKRISEALFTHYNTTLYRIQRIKQITELDLEDQRDRLNLEVALKIKKILKK

>Amet_4589_UniProt_A6TWU2
MLLVHKTVEEFVNGVESNEPAPGGGSVAALGGSLGAALTAMVGNLSIGKKTYEQLTEAQQKEMNIQFKKVVQLKEKLNHLIDEDTNAFNEVMGAFKLPKETEEEKALRKEAIQKATKVALEVPLLAATESLNVLKTQKIFAEYGNINAITDIGVGALMAYAGLEGALFNVEINLQGIKDEAYVKSVREECDILIKTGKALKEEVLETVYKKLGK

>Amet_4590_UniProt_A6TWU3
MKEKRIIKVTGLQKPINEETHEIELVTEGTCYEKNENLYIVYEESEISGMEGTTTTLKLEGEDKVVLSRYGTSASQMVFQESKRVNSFYDTLYGQFKMELITHHLDIQVDQDTKRGHIEIHYDLNITGLMESSNKLKIQLM

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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